{"type":"rich","height":"190","author_url":"https://blog.hatena.ne.jp/hashiyuki/","provider_name":"Hatena Blog","published":"2015-03-25 22:10:07","html":"<iframe src=\"https://hatenablog-parts.com/embed?url=https%3A%2F%2Fhashiyuki.hatenablog.com%2Fentry%2F2015%2F03%2F25%2F221007\" title=\"\u3053\u306e\u30d6\u30ed\u30b0\u306e\u65b9\u91dd - NGS\u30c7\u30fc\u30bf\u89e3\u6790\u307e\u3068\u3081\" class=\"embed-card embed-blogcard\" scrolling=\"no\" frameborder=\"0\" style=\"display: block; width: 100%; height: 190px; max-width: 500px; margin: 10px 0px;\"></iframe>","blog_title":"NGS\u30c7\u30fc\u30bf\u89e3\u6790\u307e\u3068\u3081","image_url":null,"url":"https://hashiyuki.hatenablog.com/entry/2015/03/25/221007","title":"\u3053\u306e\u30d6\u30ed\u30b0\u306e\u65b9\u91dd","provider_url":"https://hatena.blog","blog_url":"https://hashiyuki.hatenablog.com/","width":"100%","author_name":"hashiyuki","categories":["\u30e1\u30e2"],"description":"\u3068\u308a\u3042\u3048\u305a\u3001\u81ea\u5206\u304c\u65e5\u3005\u4f5c\u3063\u3066\u3044\u308bNGS\u95a2\u4fc2\u306ePerl script\u306e\u65ad\u7247\u3068\u304b\u3001NGS\u95a2\u9023\u3001\u9032\u5316\u751f\u7269\u95a2\u9023\u306e\u30d7\u30ed\u30b0\u30e9\u30e0\u306e\u4f7f\u3044\u65b9\u3068\u304b\u3092open\u306b\u3057\u3066\u304a\u304f\u3001\u534a\u5206\u4ee5\u4e0a\u81ea\u5206\u306e\u305f\u3081\u306e\u30e1\u30e2\u3001\u3068\u3044\u3046\u4f7f\u3044\u65b9\u3067\u3069\u3046\u304b\uff1f\u5f53\u9762\u306e\u8a18\u4e8b\uff08\u4f55\u304b\u66f8\u3051\u305d\u3046\u306a\u3082\u306e\uff09 Trinity --> Trinotate\u306b\u3088\u308bRNA-Seq\u30c7\u30fc\u30bf\u306eSQlite database\u4f5c\u6210 RNA-Seq\u30c7\u30fc\u30bf\u3092\u4f7f\u3063\u305f\u591a\u6570\u907a\u4f1d\u5b50\u3067\u306e\u7cfb\u7d71\u89e3\u6790\u305d\u306e1\uff08\u30a2\u30bb\u30f3\u30d6\u30eb\u7de8: STAMPY\u3092\u4f7f\u3046\uff09 RNA-Seq\u30c7\u30fc\u30bf\u3092\u4f7f\u3063\u305f\u591a\u6570\u907a\u4f1d\u5b50\u3067\u306e\u7cfb\u7d71\u89e3\u6790\u305d\u306e2\uff08\u7cfb\u7d71\u6a39\u7de8_1: \u5168sequence\u3092concatenate\u3057\u3066\u66f8\u304f\uff09 RNA-Seq\u30c7\u30fc\u30bf\u3092\u4f7f\u3063\u305f\u591a\u6570\u907a\u4f1d\u5b50\u3067\u2026","version":"1.0"}