{"title":"Varscan2 \u306e\u89e3\u6790\u306e\u6d41\u308c","categories":["SNV","tumor","small indel","family trios","germline","somatic mutation","2013","2012","workflow","Copy Number Variation (CNV)"],"blog_url":"https://kazumaxneo.hatenablog.com/","author_name":"kazumaxneo","published":"2018-08-20 18:52:17","width":"100%","url":"https://kazumaxneo.hatenablog.com/entry/2018/08/20/185217","author_url":"https://blog.hatena.ne.jp/kazumaxneo/","provider_url":"https://hatena.blog","provider_name":"Hatena Blog","blog_title":"mac\u3067\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9","html":"<iframe src=\"https://hatenablog-parts.com/embed?url=https%3A%2F%2Fkazumaxneo.hatenablog.com%2Fentry%2F2018%2F08%2F20%2F185217\" title=\"Varscan2 \u306e\u89e3\u6790\u306e\u6d41\u308c - mac\u3067\u30a4\u30f3\u30d5\u30a9\u30de\u30c6\u30a3\u30af\u30b9\" class=\"embed-card embed-blogcard\" scrolling=\"no\" frameborder=\"0\" style=\"display: block; width: 100%; height: 190px; max-width: 500px; margin: 10px 0px;\"></iframe>","version":"1.0","image_url":"https://cdn-ak.f.st-hatena.com/images/fotolife/k/kazumaxneo/20180820/20180820214531.png","description":"\u4fee\u6b63 \u4e0d\u78ba\u304b\u306a\u60c5\u5831\u3092\u524a\u9664 2019 2/17 \u8aa4\u5b57\u4fee\u6b63 Using VarScan 2 for Germline Variant Calling and Somatic Mutation Detection\uff08Daniel C. Koboldt et al., 2013\uff09\u3088\u308a \u30b7\u30f3\u30b0\u30eb\u30cc\u30af\u30ec\u30aa\u30c1\u30c9\u5909\u7570\uff08SNV\uff09\u304a\u3088\u3073\u5c0f\u3055\u306a\u633f\u5165/\u6b20\u5931\uff08indels\uff09\u306e\u3088\u3046\u306a\u30d0\u30ea\u30a2\u30f3\u30c8\u306e\u540c\u5b9a\u306f\u3001\u30ea\u30b7\u30fc\u30af\u30a8\u30f3\u30b7\u30f3\u30b0\u30c7\u30fc\u30bf\u306e\u89e3\u6790\u306b\u304a\u3051\u308b\u91cd\u8981\u306a\u30b9\u30c6\u30c3\u30d7\u3067\u3042\u308b\u3002\u6b21\u4e16\u4ee3\u30b7\u30fc\u30af\u30a8\u30f3\u30b7\u30f3\u30b0\uff08NGS\uff09\u6a5f\u5668\u306e\u9a5a\u7570\u7684\u306a\u30b9\u30eb\u30fc\u30d7\u30c3\u30c8\u306f\u3001\u5f93\u6765\u306e\u30ad\u30e3\u30d4\u30e9\u30ea\u30fc\u30d9\u30fc\u30b9\u306e\u30b7\u30fc\u30af\u30a8\u30f3\u30b7\u30f3\u30b0\uff08Mardis 2008\uff09\u306e\u30b3\u30b9\u30c8\u306e\u307b\u3093\u306e\u4e00\u90e8\u304b\u3064\u6bd4\u8f03\u7684\u77ed\u6642\u2026","height":"190","type":"rich"}