{"blog_url":"https://mikuhatsune.hatenadiary.com/","version":"1.0","provider_name":"Hatena Blog","width":"100%","blog_title":"\u9a5a\u7570\u306e\u30a2\u30cb\u30f2\u30bf\u793e\u4f1a\u5fa9\u5e30\u306e\u4e88\u5099","published":"2013-06-17 19:19:59","provider_url":"https://hatena.blog","html":"<iframe src=\"https://hatenablog-parts.com/embed?url=https%3A%2F%2Fmikuhatsune.hatenadiary.com%2Fentry%2F20130617%2F1371464399\" title=\"SNP-set (Sequence) Kernel Association Test (SKAT) - \u9a5a\u7570\u306e\u30a2\u30cb\u30f2\u30bf\u793e\u4f1a\u5fa9\u5e30\u306e\u4e88\u5099\" class=\"embed-card embed-blogcard\" scrolling=\"no\" frameborder=\"0\" style=\"display: block; width: 100%; height: 190px; max-width: 500px; margin: 10px 0px;\"></iframe>","url":"https://mikuhatsune.hatenadiary.com/entry/20130617/1371464399","type":"rich","categories":["R","\u907a\u4f1d\u533b\u5b66","\u6bd2\u6027","Rpackage","R\u3092\u4f7f\u3044\u3053\u306a\u3059"],"author_name":"MikuHatsune","image_url":"https://cdn-ak.d.st-hatena.com/diary/MikuHatsune/2013-06-17.png","author_url":"https://blog.hatena.ne.jp/MikuHatsune/","description":"SKAT\u3068\u3044\u3046\u624b\u6cd5\u304c\u3042\u308b\u3089\u3057\u3044\u3002 kernel method\u3068\u3044\u3046\u306a\u3093\u3068\u3082\u4e2d\u4e8c\u75c5\u7684\u30cd\u30fc\u30df\u30f3\u30b0\u306e\u624b\u6cd5\u3092\u7528\u3044\u3066\u3001\u30ec\u30a2\u30d0\u30ea\u30a2\u30f3\u30c8\u304c\u3069\u3046\u305f\u3089\u3053\u3046\u305f\u3089\u8a00\u3063\u3066\u3044\u305f\u304c\u3061\u3087\u3063\u3068\u8ffd\u3044\u3064\u3051\u306a\u304b\u3063\u305f\u3002 SKAT\u3092\u3084\u3063\u3066\u307f\u308b\u3002 \u6614\u3084\u3063\u305f\u30ed\u30b8\u30b9\u30c6\u30a3\u30c3\u30af\u56de\u5e30\u3092\u3084\u308b\u3068 library(SKAT) data(SKAT.example) attach(SKAT.example) g0 <- glm(y.b ~ y.c, data=SKAT.example, family=\"binomial\") p <- function(x){ 1/(1+exp(-sum(g0$coefficients * c(1, x)))) } s0 <\u2026","title":"SNP-set (Sequence) Kernel Association Test (SKAT)","height":"190"}