{"height":"190","type":"rich","html":"<iframe src=\"https://hatenablog-parts.com/embed?url=https%3A%2F%2Fmikuhatsune.hatenadiary.com%2Fentry%2F20130909%2F1378740976\" title=\"MEGADOCK - \u9a5a\u7570\u306e\u30a2\u30cb\u30f2\u30bf\u793e\u4f1a\u5fa9\u5e30\u306e\u4e88\u5099\" class=\"embed-card embed-blogcard\" scrolling=\"no\" frameborder=\"0\" style=\"display: block; width: 100%; height: 190px; max-width: 500px; margin: 10px 0px;\"></iframe>","provider_url":"https://hatena.blog","author_url":"https://blog.hatena.ne.jp/MikuHatsune/","width":"100%","image_url":"https://cdn-ak.f.st-hatena.com/images/fotolife/M/MikuHatsune/20130909/20130909235624.png","title":"MEGADOCK","url":"https://mikuhatsune.hatenadiary.com/entry/20130909/1378740976","author_name":"MikuHatsune","categories":[],"blog_title":"\u9a5a\u7570\u306e\u30a2\u30cb\u30f2\u30bf\u793e\u4f1a\u5fa9\u5e30\u306e\u4e88\u5099","description":"\u30bf\u30f3\u30d1\u30af\u9593\u76f8\u4e92\u4f5c\u7528\u306fMEGADOCK\u3092\u7528\u3044\u3066\u8a08\u7b97\u3067\u304d\u308b\u3002PDB ID:1PPE \u3068\u3044\u3046\u8907\u5408\u4f53\u3068\u304b\u3044\u3046\u30bf\u30f3\u30d1\u30af\u306e\u30c9\u30c3\u30ad\u30f3\u30b0\u3092\u30b5\u30f3\u30d7\u30eb\u3068\u3057\u3066\u884c\u3046\u3002\u30c7\u30fc\u30bf\u306f\u3053\u3061\u3089\u304b\u3089\u5165\u624b\u3057\u3066\u89e3\u51cd\u3057\u305f\u3089 tutorial \u3068\u3044\u3046\u30d5\u30a9\u30eb\u30c0\u304c\u3042\u308b\u306e\u3067\u3053\u3053\u3067\u4f5c\u696d\u3059\u308b\u3002 MEGADOCK\u306f\u30ce\u30fc\u30c8PC\u304b\u3089\u30b9\u30d1\u30b3\u30f3\u307e\u3067\u5e45\u5e83\u304f\u4e26\u5217\u8a08\u7b97\u306b\u5bfe\u5fdc\u3057\u3066\u3044\u308b\u30022 core 4 threads \u306e\u30ce\u30fc\u30c8PC\u306a\u306e\u3067\u4f7f\u7528\u3059\u308b\u30b9\u30ec\u30c3\u30c9\u3092\u8a2d\u5b9a\u3059\u308b\u3002 export OMP_NUM_THREADS=2 \u5bfe\u8c61 PDB 2\u3064\u3001\u51fa\u529b\u30d5\u30a1\u30a4\u30eb\u306e\u540d\u524d\u3092 1PPE(.out)\u306b\u3001\u5019\u88dc\u69cb\u9020\u3092 1000 \u500b\u51fa\u529b\u3059\u308b\u3002 megadock -R pdb/1BTP.pdb -\u2026","published":"2013-09-09 00:36:16","provider_name":"Hatena Blog","blog_url":"https://mikuhatsune.hatenadiary.com/","version":"1.0"}